Sim, o diálogo referente ao deus hindu Krishna foi removido do corte final do filme.
De este artigo (que editei um pouco);
Hindus are thankful to 20th Century Fox and Director Bryan Singer for deleting reference to Lord Krishna in the movie “X-Men: Apocalypse”.
Hindu statesman Rajan Zed wrote to 20th Century Fox in March last urging Singer and 20th Century Fox Chairman James N. Gianopulos to not have any inappropriate references to Lord Krishna in the final movie, unless those were true to the scriptures or based on scriptures.
In a statement in Nevada today, he expressed thanks to Singer and Fox for deleting reference to Lord Krishna in the final movie, thus showing maturity and responsibility, and understanding the feelings of Hindu community.